libpappsomspp
Library for mass spectrometry
obopsimod.h
Go to the documentation of this file.
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/*******************************************************************************
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* Copyright (c) 2015 Olivier Langella <Olivier.Langella@moulon.inra.fr>.
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*
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* This file is part of the PAPPSOms++ library.
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*
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* PAPPSOms++ is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* PAPPSOms++ is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
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*
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* Contributors:
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* Olivier Langella <Olivier.Langella@moulon.inra.fr> - initial API and
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*implementation
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******************************************************************************/
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#pragma once
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#include <QRegularExpression>
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#include "../types.h"
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#include "../exportinmportconfig.h"
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#include "
obopsimodterm.h
"
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#include "
obopsimodhandlerinterface.h
"
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namespace
pappso
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{
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class
PMSPP_LIB_DECL
OboPsiMod
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{
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public
:
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OboPsiMod
(
OboPsiModHandlerInterface
&handler);
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~
OboPsiMod
();
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private
:
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OboPsiModTerm
m_term
;
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OboPsiModHandlerInterface
&
m_handler
;
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/** @brief starts reading obo file and reports each term with the callback
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* function
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*/
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void
parse();
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};
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}
// namespace pappso
pappso::OboPsiModHandlerInterface
Definition:
obopsimodhandlerinterface.h:31
pappso::OboPsiModTerm
Definition:
obopsimodterm.h:32
pappso::OboPsiMod
Definition:
obopsimod.h:35
pappso::OboPsiMod::m_term
OboPsiModTerm m_term
Definition:
obopsimod.h:41
pappso::OboPsiMod::m_handler
OboPsiModHandlerInterface & m_handler
Definition:
obopsimod.h:42
PMSPP_LIB_DECL
#define PMSPP_LIB_DECL
Definition:
exportinmportconfig.h:14
pappso
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition:
aa.cpp:39
obopsimodhandlerinterface.h
obopsimodterm.h
pappsomspp
obo
obopsimod.h
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