libpappsomspp
Library for mass spectrometry
pappso::MsRunXicExtractor Member List
This is the complete list of members for
pappso::MsRunXicExtractor
, including all inherited members.
extractOneXicCoord
(XicCoord &xic_coord)
pappso::MsRunXicExtractor
private
extractXicCoordSPtrList
(UiMonitorInterface &monitor, std::vector< XicCoordSPtr > &xic_coord_list) final
pappso::MsRunXicExtractorInterface
virtual
extractXicCoordSPtrListParallelized
(UiMonitorInterface &monitor, std::vector< XicCoordSPtr > &xic_coord_list) final
pappso::MsRunXicExtractorInterface
virtual
getMsRunId
() const
pappso::MsRunXicExtractorInterface
getMsRunReaderSPtr
() const
pappso::MsRunXicExtractorInterface
getXicFromPwizMSDataFile
(std::vector< Xic * > &xic_list, const std::vector< MzRange > &mass_range_list, pappso::pappso_double rt_begin, pappso::pappso_double rt_end)
pappso::MsRunXicExtractor
protected
virtual
m_msrun_points
pappso::MsRunXicExtractor
protected
m_retentionTimeAroundTarget
pappso::MsRunXicExtractorInterface
protected
m_xicExtractMethod
pappso::MsRunXicExtractorInterface
protected
mcsp_postExtractionTraceFilter
pappso::MsRunXicExtractorInterface
protected
msp_msrun_reader
pappso::MsRunXicExtractorInterface
protected
MsRunXicExtractor
(const MsRunXicExtractor &other)
pappso::MsRunXicExtractor
MsRunXicExtractor
(MsRunReaderSPtr &msrun_reader)
pappso::MsRunXicExtractor
protected
MsRunXicExtractorFactory
pappso::MsRunXicExtractor
private
MsRunXicExtractorInterface
(MsRunReaderSPtr &msrun_reader)
pappso::MsRunXicExtractorInterface
protected
MsRunXicExtractorInterface
(const MsRunXicExtractorInterface &other)
pappso::MsRunXicExtractorInterface
protected
postExtractionProcess
(UiMonitorInterface &monitor, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_begin, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_end)
pappso::MsRunXicExtractorInterface
protected
virtual
protectedExtractXicCoordSPtrList
(UiMonitorInterface &monitor, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_begin, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_end) override
pappso::MsRunXicExtractor
protected
virtual
setPostExtractionTraceFilterCstSPtr
(pappso::FilterInterfaceCstSPtr &filter)
pappso::MsRunXicExtractorInterface
setRetentionTimeAroundTarget
(double range_in_seconds)
pappso::MsRunXicExtractorInterface
setXicExtractMethod
(XicExtractMethod method)
pappso::MsRunXicExtractorInterface
~MsRunXicExtractor
()
pappso::MsRunXicExtractor
virtual
~MsRunXicExtractorInterface
()
pappso::MsRunXicExtractorInterface
protected
virtual
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