libpappsomspp
Library for mass spectrometry
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base interface to read MSrun files More...
#include <memory>
#include <map>
#include <QMutex>
#include "../trace/maptrace.h"
#include "msrunid.h"
#include "../massspectrum/qualifiedmassspectrum.h"
#include "../msfile/msfilereader.h"
#include "../exportinmportconfig.h"
#include "xiccoord/xiccoord.h"
Go to the source code of this file.
Classes | |
class | pappso::SpectrumCollectionHandlerInterface |
interface to collect spectrums from the MsRunReader class More... | |
class | pappso::MsRunSimpleStatistics |
example of interface to count MS levels of all spectrum in an MSrun More... | |
class | pappso::MsRunReaderScanNumberMultiMap |
provides a multimap to find quickly spectrum index from scan number More... | |
class | pappso::MsRunReaderRetentionTimeLine |
collect retention times along MS run More... | |
class | pappso::MsRunReaderTicChromatogram |
calculate a TIC chromatogram More... | |
class | pappso::MsRunReader |
base class to read MSrun the only way to build a MsRunReader object is to use the MsRunReaderFactory More... | |
Namespaces | |
pappso | |
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multicharge peaks to monocharge | |
Typedefs | |
typedef std::shared_ptr< MsRunReader > | pappso::MsRunReaderSPtr |
typedef std::shared_ptr< const MsRunReader > | pappso::MsRunReaderCstSPtr |
Functions | |
Q_DECLARE_METATYPE (pappso::MsRunReaderSPtr) | |
Variables | |
class PMSPP_LIB_DECL | pappso::MsRunReader |
int | msRunReaderSPtrMetaTypeId |
Q_DECLARE_METATYPE | ( | pappso::MsRunReaderSPtr | ) |
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extern |
Definition at line 35 of file msrunreader.cpp.