libpappsomspp
Library for mass spectrometry
pappso::PsmFeatures Member List

This is the complete list of members for pappso::PsmFeatures, including all inherited members.

countMatchedIonComplementPairs() constpappso::PsmFeatures
findComplementIonPairs(const pappso::PeptideSp &peptideSp)pappso::PsmFeaturesprivate
getAaSequenceCoverage(PeptideIon ion_type)pappso::PsmFeatures
getComplementPairsAaSequenceCoverage()pappso::PsmFeatures
getIntensityOfMatchedIon(PeptideIon ion_type)pappso::PsmFeatures
getIonPairPrecursorMassDelta(const std::pair< pappso::PeakIonIsotopeMatch, pappso::PeakIonIsotopeMatch > &ion_pair) constpappso::PsmFeatures
getMatchedMzDiffMean() constpappso::PsmFeatures
getMatchedMzDiffSd() constpappso::PsmFeatures
getMaxConsecutiveIon(PeptideIon ion_type)pappso::PsmFeatures
getMaxIntensityMatchedIonComplementPairPrecursorMassDelta() constpappso::PsmFeatures
getMaxIntensityPeakIonMatch(PeptideIon ion_type) constpappso::PsmFeatures
getNumberOfMatchedIons() constpappso::PsmFeatures
getPeakIonPairs() constpappso::PsmFeatures
getTotalIntensity() constpappso::PsmFeatures
getTotalIntensityOfMatchedIonComplementPairs() constpappso::PsmFeatures
getTotalIntensityOfMatchedIons() constpappso::PsmFeatures
m_ionListpappso::PsmFeaturesprivate
m_matchedMzDiffMeanpappso::PsmFeaturesprivate
m_matchedMzDiffMedianpappso::PsmFeaturesprivate
m_matchedMzDiffSdpappso::PsmFeaturesprivate
m_ms2precisionpappso::PsmFeaturesprivate
m_parentChargepappso::PsmFeaturesprivate
m_peakIonPairspappso::PsmFeaturesprivate
m_precursorTheoreticalMasspappso::PsmFeaturesprivate
m_precursorTheoreticalMzpappso::PsmFeaturesprivate
m_spectrumSumIntensitypappso::PsmFeaturesprivate
msp_filterChargeDeconvolutionpappso::PsmFeaturesprivate
msp_filterKeepGreaterpappso::PsmFeaturesprivate
msp_filterMzExclusionpappso::PsmFeaturesprivate
msp_peptidepappso::PsmFeaturesprivate
msp_peptideSpectrumMatchpappso::PsmFeaturesprivate
PsmFeatures(PrecisionPtr ms2precision, double minimumMz)pappso::PsmFeatures
setPeptideSpectrumCharge(const pappso::PeptideSp peptideSp, const MassSpectrum *p_spectrum, unsigned int parent_charge)pappso::PsmFeatures
~PsmFeatures()pappso::PsmFeatures