libpappsomspp
Library for mass spectrometry
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This header contains all the type re-definitions and all the global variables definitions used in the PAPPSOms++ library. More...
#include <QString>
Go to the source code of this file.
Namespaces | |
pappso | |
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multicharge peaks to monocharge | |
Macros | |
#define | PEPTIDE_ION_TYPE_COUNT 14 |
only usefull for inernal usefull DO not change this value : it is used to define static array size More... | |
Typedefs | |
typedef QString | pappso::PeptideStr |
A type definition for PeptideStr. More... | |
typedef double | pappso::pappso_double |
A type definition for doubles. More... | |
typedef float | pappso::pappso_float |
typedef unsigned int | pappso::uint |
Functions | |
const pappso_double | pappso::MHPLUS (1.007276466879) |
const pappso_double | pappso::MPROTON (1.007276466879) |
const pappso_double | pappso::MPROTIUM (1.007825032241) |
const pappso_double | pappso::ONEMILLION (1000000) |
const pappso_double | pappso::MASSOXYGEN (15.99491461956) |
const pappso_double | pappso::MASSCARBON (12) |
const pappso_double | pappso::MASSH2O ((MPROTIUM *2)+MASSOXYGEN) |
const pappso_double | pappso::MASSNITROGEN (14.0030740048) |
const pappso_double | pappso::MASSNH3 ((MPROTIUM *3)+MASSNITROGEN) |
const pappso_double | pappso::MASSCO (MASSCARBON+MASSOXYGEN) |
const pappso_double | pappso::MASSPHOSPHORUS (30.973761998) |
const pappso_double | pappso::MASSSULFUR (31.9720711741) |
const pappso_double | pappso::MASSPHOSPHORYLATEDR (MPROTIUM+(MASSOXYGEN *3)+MASSPHOSPHORUS) |
const pappso_double | pappso::MASSSELENIUM (79.916520) |
const pappso_double | pappso::DIFFC12C13 (1.0033548378) |
const pappso_double | pappso::DIFFS32S33 (32.9714589101 - MASSSULFUR) |
const pappso_double | pappso::DIFFS32S34 (33.9678670300 - MASSSULFUR) |
const pappso_double | pappso::DIFFS32S36 (35.9670812000 - MASSSULFUR) |
const pappso_double | pappso::DIFFH1H2 (2.0141017778 - MPROTIUM) |
const pappso_double | pappso::DIFFO16O18 (17.9991610 - MASSOXYGEN) |
const pappso_double | pappso::DIFFO16O17 (16.99913150 - MASSOXYGEN) |
const pappso_double | pappso::DIFFN14N15 (15.0001088982 - MASSNITROGEN) |
const pappso_double | pappso::ABUNDANCEH2 (0.00011570983569203332000374651045149221317842602729797363281250) |
const pappso_double | pappso::ABUNDANCEN15 (0.00364198543205827118818262988497735932469367980957031250000000) |
const pappso_double | pappso::ABUNDANCEO17 (0.00038099847600609595965615028489992255344986915588378906250000) |
const pappso_double | pappso::ABUNDANCEO18 (0.00205139179443282221315669744399201590567827224731445312500000) |
const pappso_double | pappso::ABUNDANCEC13 (0.01078805814953308406245469086570665240287780761718750000000000) |
const pappso_double | pappso::ABUNDANCEC12 (0.98921194185046687152862432412803173065185546875000000000000000) |
const pappso_double | pappso::ABUNDANCES33 (0.00751939844812414937003097747947322204709053039550781250000000) |
const pappso_double | pappso::ABUNDANCES34 (0.04252059835213182203972337447339668869972229003906250000000000) |
const pappso_double | pappso::ABUNDANCES36 (0.00010999120070394368536836893213148869108408689498901367187500) |
This header contains all the type re-definitions and all the global variables definitions used in the PAPPSOms++ library.
https://forgemia.inra.fr/pappso/massxpert/-/blob/be60e53480f68d36afa95c809cffd68d4fb46c79/data/polChemDefs/protein-1-letter-libisospec-atomic-data/protein-1-letter-libisospec-atomic-data.xml abundance of sulfur extracted from 'massXpert' polymer definitions
Definition in file types.h.