libpappsomspp
Library for mass spectrometry
pappso::MsRunXicExtractor Member List

This is the complete list of members for pappso::MsRunXicExtractor, including all inherited members.

extractOneXicCoord(XicCoord &xic_coord)pappso::MsRunXicExtractorprivate
extractXicCoordSPtrList(UiMonitorInterface &monitor, std::vector< XicCoordSPtr > &xic_coord_list) finalpappso::MsRunXicExtractorInterfacevirtual
extractXicCoordSPtrListParallelized(UiMonitorInterface &monitor, std::vector< XicCoordSPtr > &xic_coord_list) finalpappso::MsRunXicExtractorInterfacevirtual
getMsRunId() constpappso::MsRunXicExtractorInterface
getMsRunReaderSPtr() constpappso::MsRunXicExtractorInterface
getXicFromPwizMSDataFile(std::vector< Xic * > &xic_list, const std::vector< MzRange > &mass_range_list, pappso::pappso_double rt_begin, pappso::pappso_double rt_end)pappso::MsRunXicExtractorprotectedvirtual
m_msrun_pointspappso::MsRunXicExtractorprotected
m_retentionTimeAroundTargetpappso::MsRunXicExtractorInterfaceprotected
m_xicExtractMethodpappso::MsRunXicExtractorInterfaceprotected
mcsp_postExtractionTraceFilterpappso::MsRunXicExtractorInterfaceprotected
msp_msrun_readerpappso::MsRunXicExtractorInterfaceprotected
MsRunXicExtractor(const MsRunXicExtractor &other)pappso::MsRunXicExtractor
MsRunXicExtractor(MsRunReaderSPtr &msrun_reader)pappso::MsRunXicExtractorprotected
MsRunXicExtractorFactorypappso::MsRunXicExtractorprivate
MsRunXicExtractorInterface(MsRunReaderSPtr &msrun_reader)pappso::MsRunXicExtractorInterfaceprotected
MsRunXicExtractorInterface(const MsRunXicExtractorInterface &other)pappso::MsRunXicExtractorInterfaceprotected
postExtractionProcess(UiMonitorInterface &monitor, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_begin, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_end)pappso::MsRunXicExtractorInterfaceprotectedvirtual
protectedExtractXicCoordSPtrList(UiMonitorInterface &monitor, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_begin, std::vector< XicCoordSPtr >::iterator it_xic_coord_list_end) overridepappso::MsRunXicExtractorprotectedvirtual
setPostExtractionTraceFilterCstSPtr(pappso::FilterInterfaceCstSPtr &filter)pappso::MsRunXicExtractorInterface
setRetentionTimeAroundTarget(double range_in_seconds)pappso::MsRunXicExtractorInterface
setXicExtractMethod(XicExtractMethod method)pappso::MsRunXicExtractorInterface
~MsRunXicExtractor()pappso::MsRunXicExtractorvirtual
~MsRunXicExtractorInterface()pappso::MsRunXicExtractorInterfaceprotectedvirtual