libpappsomspp
Library for mass spectrometry
mgfoutput.h
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1 /**
2  * \file pappsomspp/msrun/output/mgfoutput.h
3  * \date 6/5/2020
4  * \author Olivier Langella
5  * \brief write msrun peaks into MGF output stream
6  */
7 
8 /*******************************************************************************
9  * Copyright (c) 2020 Olivier Langella <Olivier.Langella@u-psud.fr>.
10  *
11  * This file is part of the PAPPSOms++ library.
12  *
13  * PAPPSOms++ is free software: you can redistribute it and/or modify
14  * it under the terms of the GNU General Public License as published by
15  * the Free Software Foundation, either version 3 of the License, or
16  * (at your option) any later version.
17  *
18  * PAPPSOms++ is distributed in the hope that it will be useful,
19  * but WITHOUT ANY WARRANTY; without even the implied warranty of
20  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
21  * GNU General Public License for more details.
22  *
23  * You should have received a copy of the GNU General Public License
24  * along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
25  *
26  ******************************************************************************/
27 
28 #pragma once
29 
30 #include <QIODevice>
31 #include <QTextStream>
32 #include "../../massspectrum/qualifiedmassspectrum.h"
33 
34 namespace pappso
35 {
36 /**
37  * @todo write docs
38  */
40 {
41  public:
42  /**
43  * Default constructor
44  */
45  MgfOutput(QIODevice *p_output_device);
46  void write(const QualifiedMassSpectrum &mass_spectrum);
47  void close();
48 
49  /**
50  * Destructor
51  */
52  virtual ~MgfOutput();
53 
54  private:
55  QTextStream *mpa_outputStream;
56 };
57 } // namespace pappso
QTextStream * mpa_outputStream
Definition: mgfoutput.h:55
Class representing a fully specified mass spectrum.
#define PMSPP_LIB_DECL
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition: aa.cpp:39