39 #include "../../trace/trace.h"
40 #include "../../exportinmportconfig.h"
48 class FilterLowIntensitySignalRemoval;
50 typedef std::shared_ptr<FilterLowIntensitySignalRemoval>
52 typedef std::shared_ptr<const FilterLowIntensitySignalRemoval>
86 Trace &filter(
Trace &data_points)
const override;
88 double getThreshold()
const;
89 QString name()
const override;
91 QString toString()
const override;
94 void buildFilterFromString(
const QString &strBuildParams)
override;
98 std::size_t detectClusterApices(
const Trace &trace);
100 Trace::const_iterator backwardFindApex(
const Trace &trace,
101 Trace::const_iterator iter,
102 double distance_threshold);
104 Trace::const_iterator forwardFindApex(
const Trace &trace,
105 Trace::const_iterator iter,
106 double distance_threshold);
110 static constexpr
double nan = std::numeric_limits<double>::quiet_NaN();
116 constexpr
static double INTRA_CLUSTER_INTER_PEAK_DISTANCE = 1.1;
118 const std::size_t m_minIntPointCount = 5;
119 const std::size_t m_minIntStdDevFactor = 2;
127 bool m_seen_upward_phase =
false;
132 TraceCIter m_prevApex =
static_cast<Trace::const_iterator
>(0);
133 TraceCIter m_curApex =
static_cast<Trace::const_iterator
>(0);
134 TraceCIter m_curIter =
static_cast<Trace::const_iterator
>(0);
135 TraceCIter m_prevIter =
static_cast<Trace::const_iterator
>(0);
Redefines the floor intensity of the Trace.
std::shared_ptr< ClusterApices > ApicesSPtr
std::vector< TraceCIter > ClusterApices
Trace::const_iterator TraceCIter
std::vector< ApicesSPtr > m_clusters
Interface that allows to build filter objects from strings.
A simple container of DataPoint instances.
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
std::shared_ptr< const FilterLowIntensitySignalRemoval > FilterLowIntensitySignalRemovalCstSPtr
std::shared_ptr< FilterLowIntensitySignalRemoval > FilterLowIntensitySignalRemovalSPtr