Here is a list of all class members with links to the classes they belong to:
- r -
- raise()
: pappso::PappsoException
- range()
: pappso::SelectionPolygon
- rangeX()
: pappso::SelectionPolygon
- rangeY()
: pappso::SelectionPolygon
- rawReaderSpectrumCollectionByMsLevel()
: pappso::TimsData
- rbegin()
: pappso::Peptide
- read()
: pappso::XmlStreamReaderInterface
- read_note()
: pappso::XtandemPresetReader
- readFile()
: pappso::XmlStreamReaderInterface
- readSpectrumCollection()
: pappso::MsRunReader
, pappso::PwizMsRunReader
, pappso::TimsFramesMsRunReader
, pappso::TimsMsRunReader
, pappso::TimsMsRunReaderMs2
, pappso::TimsMsRunReaderMs2Selected
, pappso::XyMsRunReader
- readSpectrumCollectionByMsLevel()
: pappso::MsRunReader
, pappso::PwizMsRunReader
, pappso::TimsFramesMsRunReader
, pappso::TimsMsRunReader
, pappso::TimsMsRunReaderMs2
, pappso::XyMsRunReader
- readStream()
: pappso::WrapTandemInput
, pappso::WrapTandemResults
, pappso::XmlStreamReaderInterface
, pappso::XtandemPresetReader
- readTandemPresetFile()
: pappso::TandemWrapperRun
- readTimsFrame()
: pappso::TimsFrameRawDataChunck
- readyReadStandardError()
: pappso::TandemWrapperRun
- readyReadStandardOutput()
: pappso::TandemWrapperRun
- realft()
: pappso::FilterSavitzkyGolay
- reconstructTrace()
: pappso::FilterLowIntensitySignalRemoval
- recordDragDirections()
: pappso::BasePlotContext
- recursiveDepletion()
: pappso::PeptideNaturalIsotopeAverage
- redrawPlotBackground()
: pappso::BasePlotWidget
- refreshBaseContext()
: pappso::MassSpecTracePlotWidget
- releaseDevice()
: pappso::MsRunReader
, pappso::PwizMsRunReader
, pappso::TimsFramesMsRunReader
, pappso::TimsMsRunReader
, pappso::TimsMsRunReaderMs2
, pappso::XyMsRunReader
- remove()
: pappso::GrpMapPeptideToSubGroupSet
, pappso::GrpSubGroupSet
- removeAaModification()
: pappso::Aa
, pappso::Peptide
- removeCterAminoAcid()
: pappso::Peptide
- removeDataSetQualMassSpectraOutsideDtRtRange()
: pappso::MsRunDataSetTree
- removeDataSetTreeNodesOutsideDtRtRange()
: pappso::MsRunDataSetTree
- removeFirstNonInformativeSubGroup()
: pappso::GrpGroup
- removeInternalCterModification()
: pappso::Aa
, pappso::Peptide
- removeInternalNterModification()
: pappso::Aa
, pappso::Peptide
- removeNonInformativeSubGroups()
: pappso::GrpExperiment
, pappso::GrpGroup
- removeNterAminoAcid()
: pappso::Peptide
- removeTraceInExclusionMargin()
: pappso::FilterMzExclusion
- removeTranslationStop()
: pappso::Protein
- removingNonInformativeSubGroupsInGroup()
: pappso::GrpGroupingMonitor
, pappso::GrpGroupingMonitorInterface
- rend()
: pappso::Peptide
- replaceAaModification()
: pappso::Aa
, pappso::Peptide
- replaceLeucineIsoleucine()
: pappso::AaBase
, pappso::Peptide
- replaceModificationsAtPosition()
: pappso::PeptideVariableModificationReplacement
- replaceWildcards()
: pappso::Enzyme
- replotAll()
: pappso::XicWidget
- replotWithAxesRanges()
: pappso::BasePlotWidget
- replotWithAxisRangeX()
: pappso::BasePlotWidget
- replotWithAxisRangeY()
: pappso::BasePlotWidget
- rescale()
: pappso::MassSpectrumWidget
, pappso::QCPSpectrum
, pappso::QCPXic
, pappso::XicWidget
- rescaleOneRange()
: pappso::XicWidget
- reset()
: pappso::DataPoint
, pappso::MzIntegrationParams
, pappso::XicCoord
, pappso::XicCoordTims
, pappso::XtandemHyperscoreBis
- resetAxesRangeHistory()
: pappso::BasePlotWidget
- resetPoints()
: pappso::SelectionPolygon
- resetSelectionRectangle()
: pappso::BasePlotWidget
- resolvingPowerComputationSignal()
: pappso::MassSpecTracePlotWidget
- ResPrecision()
: pappso::ResPrecision
- restoreAxesRangeHistory()
: pappso::BasePlotWidget
- restorePreviousAxesRangeHistory()
: pappso::BasePlotWidget
- result_type
: ContainsAny
- retentionTime
: pappso::MsRunRetentionTime< T >::PeptideMs2Point
, pappso::MsRunRetentionTimeSeamarkPoint< T >
- reverse()
: pappso::Peptide
, pappso::Protein
- rotate()
: pappso::Peptide
- roundToDecimal32bitsAsLongLongInt()
: pappso::Utils
- roundToDecimals()
: pappso::Utils
- rowCount()
: pappso::OboListModel
- rt
: pappso::MsRunXicExtractor::MsRunXicExtractorPoints
- rtChanged()
: pappso::XicWidget
- rtChangeEvent()
: pappso::XicWidget
- rtTarget
: pappso::XicCoord
- run()
: pappso::TandemWrapperRun
- runFilter()
: pappso::FilterSavitzkyGolay
- runTandem()
: pappso::TandemWrapperRun