libpappsomspp
Library for mass spectrometry
pappso::PsmFeatures Member List
This is the complete list of members for
pappso::PsmFeatures
, including all inherited members.
countMatchedIonComplementPairs
() const
pappso::PsmFeatures
findComplementIonPairs
(const pappso::PeptideSp &peptideSp)
pappso::PsmFeatures
private
getAaSequenceCoverage
(PeptideIon ion_type)
pappso::PsmFeatures
getComplementPairsAaSequenceCoverage
()
pappso::PsmFeatures
getIntensityOfMatchedIon
(PeptideIon ion_type)
pappso::PsmFeatures
getIonPairPrecursorMassDelta
(const std::pair< pappso::PeakIonIsotopeMatch, pappso::PeakIonIsotopeMatch > &ion_pair) const
pappso::PsmFeatures
getMatchedMzDiffMean
() const
pappso::PsmFeatures
getMatchedMzDiffSd
() const
pappso::PsmFeatures
getMaxConsecutiveIon
(PeptideIon ion_type)
pappso::PsmFeatures
getMaxIntensityMatchedIonComplementPairPrecursorMassDelta
() const
pappso::PsmFeatures
getMaxIntensityPeakIonMatch
(PeptideIon ion_type) const
pappso::PsmFeatures
getNumberOfMatchedIons
() const
pappso::PsmFeatures
getPeakIonPairs
() const
pappso::PsmFeatures
getTotalIntensity
() const
pappso::PsmFeatures
getTotalIntensityOfMatchedIonComplementPairs
() const
pappso::PsmFeatures
getTotalIntensityOfMatchedIons
() const
pappso::PsmFeatures
m_ionList
pappso::PsmFeatures
private
m_matchedMzDiffMean
pappso::PsmFeatures
private
m_matchedMzDiffMedian
pappso::PsmFeatures
private
m_matchedMzDiffSd
pappso::PsmFeatures
private
m_ms2precision
pappso::PsmFeatures
private
m_parentCharge
pappso::PsmFeatures
private
m_peakIonPairs
pappso::PsmFeatures
private
m_precursorTheoreticalMass
pappso::PsmFeatures
private
m_precursorTheoreticalMz
pappso::PsmFeatures
private
m_spectrumSumIntensity
pappso::PsmFeatures
private
msp_filterChargeDeconvolution
pappso::PsmFeatures
private
msp_filterKeepGreater
pappso::PsmFeatures
private
msp_filterMzExclusion
pappso::PsmFeatures
private
msp_peptide
pappso::PsmFeatures
private
msp_peptideSpectrumMatch
pappso::PsmFeatures
private
PsmFeatures
(PrecisionPtr ms2precision, double minimumMz)
pappso::PsmFeatures
setPeptideSpectrumCharge
(const pappso::PeptideSp peptideSp, const MassSpectrum *p_spectrum, unsigned int parent_charge)
pappso::PsmFeatures
~PsmFeatures
()
pappso::PsmFeatures
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