Here is a list of all class members with links to the classes they belong to:
- c -
- calculateDragDeltas()
: pappso::BasePlotWidget
- calculateMassFromChemicalComponents()
: pappso::AaModification
- charge
: pappso::PrecursorIonData
- check()
: pappso::GrpGroup
, pappso::GrpMapPeptideToSubGroupSet
- checkScanNum()
: pappso::TimsFrameBase
- checkXtandemVersion()
: pappso::TandemWrapperRun
- chronoIntervalDebugString()
: pappso::Utils
- chronoTimePointDebugString()
: pappso::Utils
- clear()
: pappso::GrpMapPeptideToGroup
, pappso::MsRunSlice
, pappso::QCPXic
, pappso::XicWidget
- clearData()
: pappso::MassSpectrumWidget
, pappso::QCPSpectrum
- clearGraphData()
: pappso::BaseTracePlotWidget
- clearTerm()
: pappso::OboPsiModTerm
- clearXicPeakBorders()
: pappso::QCPXic
, pappso::XicWidget
- clicked()
: pappso::XicWidget
- clone()
: pappso::ExceptionInterrupted
, pappso::ExceptionNotFound
, pappso::ExceptionNotImplemented
, pappso::ExceptionNotPossible
, pappso::ExceptionNotRecognized
, pappso::ExceptionOutOfRange
, pappso::PappsoException
, pappso::XtandemError
- cloneElement()
: pappso::XmlStreamReaderInterface
- cloneMassSpectrumSPtr()
: pappso::QualifiedMassSpectrum
- cloneNode()
: pappso::XmlStreamReaderInterface
- cloneStartElement()
: pappso::XmlStreamReaderInterface
- close()
: pappso::FastaFileIndexer
, pappso::FastaFileIndexerInterface
, pappso::MgfOutput
, pappso::MzxmlOutput
- closeLinearRead()
: pappso::TimsBinDec
- ClusterApices
: pappso::FilterLowIntensitySignalRemoval
- collisionEnergy
: pappso::TimsData::SpectrumDescr
- ColorMapPlotConfig()
: pappso::ColorMapPlotConfig
- combine()
: pappso::MassDataCombinerInterface
, pappso::MassSpectrumMinusCombiner
, pappso::MassSpectrumPlusCombiner
, pappso::TraceMinusCombiner
, pappso::TracePlusCombiner
- computeBestChargeOfDataPoint()
: pappso::FilterChargeDeconvolution
- computeIsotopeDeconvolution()
: pappso::FilterChargeDeconvolution
- computeIsotopeMassList()
: pappso::MassSpectrumWidget
- computeMinMaxCoordinates()
: pappso::SelectionPolygon
- computeResolvingPower()
: pappso::MassSpecTracePlotWidget
- ComputeRetentionTimeReference
: pappso::MsRunRetentionTime< T >
- computeSeamarks()
: pappso::MsRunRetentionTime< T >
- computeTicChromatogram()
: pappso::TimsFramesMsRunReader
- computeXtandemHyperscore()
: pappso::XtandemHyperscoreBis
- const_iterator
: pappso::GrpProtein
, pappso::PeptideIsotopeSpectrumMatch
, pappso::PeptideNaturalIsotopeList
, pappso::PeptideSpectrumMatch
- contains()
: pappso::GrpPeptideSet
, pappso::GrpSubGroupSet
, pappso::MzRange
, pappso::PeptideSpectrumMatch
, pappso::SelectionPolygon
- containsAll()
: pappso::GrpPeptideSet
- ContainsAny()
: ContainsAny
- containsAny()
: pappso::GrpGroup
, pappso::GrpPeptideSet
- containsRt()
: pappso::TracePeak
- containsX()
: pappso::Trace
- convertOrginalMsData2mzXmlData()
: pappso::TandemWrapperRun
- convertTo1D()
: pappso::SelectionPolygon
- convlv()
: pappso::FilterSavitzkyGolay
- convolveWithNr
: pappso::SavGolParams
- copyAndLzfDecompress()
: pappso::TimsFrameType1
- copyPoint()
: pappso::SelectionPolygon
- correctNewTimeValues()
: pappso::MsRunRetentionTime< T >
- count()
: pappso::UiMonitorInterface
, pappso::UiMonitorText
, pappso::UiMonitorTextPercent
, pappso::UiMonitorVoid
- countMatchedIonComplementPairs()
: pappso::PsmFeatures
- countModificationOnAa()
: pappso::Peptide
- countPlus()
: pappso::GrpProtein
- countTotalMatchedIons()
: pappso::PeptideSpectrumMatch
- createAllAncillaryItems()
: pappso::BasePlotWidget
- createArbitraryBins()
: pappso::MzIntegrationParams
- createBins()
: pappso::MzIntegrationParams
- createDataBasedBins()
: pappso::MzIntegrationParams
- createInstance()
: pappso::AaModification
- createInstanceMutation()
: pappso::AaModification
- cumulateScan()
: pappso::TimsFrame
, pappso::TimsFrameType1
- cumulateScansInRawMap()
: pappso::TimsFrame
, pappso::TimsFrameBase
- cumulateScansIntensities()
: pappso::TimsFrame
, pappso::TimsFrameBase
- cumulateScanToTrace()
: pappso::TimsFrame
, pappso::TimsFrameBase
- cumulateSingleScanIntensities()
: pappso::TimsFrame
, pappso::TimsFrameBase
- currentXaxisRangeIndices()
: pappso::BaseColorMapPlotWidget
- currentYaxisRangeIndices()
: pappso::BaseColorMapPlotWidget