libpappsomspp
Library for mass spectrometry
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#include <tracepeak.h>
Public Member Functions | |
TracePeak () | |
TracePeak (std::vector< DataPoint >::const_iterator it_begin, std::vector< DataPoint >::const_iterator it_end) | |
construct a peak given a trace, begin and end x coordinate More... | |
TracePeak (std::vector< DataPoint >::const_iterator it_begin, std::vector< DataPoint >::const_iterator it_end, bool remove_base) | |
construct a peak given a trace, begin and end x coordinate More... | |
TracePeak (const TracePeak &other) | |
~TracePeak () | |
TracePeakCstSPtr | makeTracePeakCstSPtr () const |
DataPoint & | getMaxXicElement () |
const DataPoint & | getMaxXicElement () const |
void | setMaxXicElement (const DataPoint &max) |
DataPoint & | getLeftBoundary () |
const DataPoint & | getLeftBoundary () const |
void | setLeftBoundary (const DataPoint &left) |
DataPoint & | getRightBoundary () |
const DataPoint & | getRightBoundary () const |
void | setRightBoundary (const DataPoint &right) |
pappso_double | getArea () const |
void | setArea (pappso_double area) |
bool | containsRt (pappso::pappso_double rt) const |
bool | operator== (const TracePeak &other) const |
TracePeak & | operator= (const TracePeak &other) |
Protected Attributes | |
pappso_double | m_area = 0 |
DataPoint | m_max |
DataPoint | m_left |
DataPoint | m_right |
@/brief Xic Peak stores peak boudaries detected from a Xic
Definition at line 39 of file tracepeak.h.
pappso::TracePeak::TracePeak | ( | ) |
Definition at line 31 of file tracepeak.cpp.
pappso::TracePeak::TracePeak | ( | std::vector< DataPoint >::const_iterator | it_begin, |
std::vector< DataPoint >::const_iterator | it_end | ||
) |
construct a peak given a trace, begin and end x coordinate
Definition at line 35 of file tracepeak.cpp.
References pappso::areaTrace(), m_area, m_left, m_max, m_right, and pappso::maxYDataPoint().
pappso::TracePeak::TracePeak | ( | std::vector< DataPoint >::const_iterator | it_begin, |
std::vector< DataPoint >::const_iterator | it_end, | ||
bool | remove_base | ||
) |
construct a peak given a trace, begin and end x coordinate
it_begin | begining of trace |
it_end | end of trace |
remove_base | if true, remove the base peak signal |
Definition at line 45 of file tracepeak.cpp.
References pappso::areaTrace(), m_area, m_left, m_max, m_right, pappso::maxYDataPoint(), pappso::DataPoint::x, and pappso::DataPoint::y.
pappso::TracePeak::TracePeak | ( | const TracePeak & | other | ) |
pappso::TracePeak::~TracePeak | ( | ) |
Definition at line 71 of file tracepeak.cpp.
bool pappso::TracePeak::containsRt | ( | pappso::pappso_double | rt | ) | const |
Definition at line 130 of file tracepeak.cpp.
References m_left, m_right, pappso::rt, and pappso::DataPoint::x.
pappso_double pappso::TracePeak::getArea | ( | ) | const |
DataPoint & pappso::TracePeak::getLeftBoundary | ( | ) |
Definition at line 93 of file tracepeak.cpp.
References m_left.
Referenced by pappso::QCPXic::drawXicPeakBorders().
const DataPoint & pappso::TracePeak::getLeftBoundary | ( | ) | const |
DataPoint & pappso::TracePeak::getMaxXicElement | ( | ) |
Definition at line 83 of file tracepeak.cpp.
References m_max.
Referenced by pappso::QCPXic::drawXicPeakBorders().
const DataPoint & pappso::TracePeak::getMaxXicElement | ( | ) | const |
DataPoint & pappso::TracePeak::getRightBoundary | ( | ) |
Definition at line 104 of file tracepeak.cpp.
References m_right.
Referenced by pappso::QCPXic::drawXicPeakBorders().
const DataPoint & pappso::TracePeak::getRightBoundary | ( | ) | const |
TracePeakCstSPtr pappso::TracePeak::makeTracePeakCstSPtr | ( | ) | const |
Definition at line 77 of file tracepeak.cpp.
bool pappso::TracePeak::operator== | ( | const TracePeak & | other | ) | const |
void pappso::TracePeak::setArea | ( | pappso_double | area | ) |
void pappso::TracePeak::setLeftBoundary | ( | const DataPoint & | left | ) |
void pappso::TracePeak::setMaxXicElement | ( | const DataPoint & | max | ) |
Definition at line 88 of file tracepeak.cpp.
References m_max, and pappso::max.
void pappso::TracePeak::setRightBoundary | ( | const DataPoint & | right | ) |
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Definition at line 88 of file tracepeak.h.
Referenced by TracePeak(), getArea(), operator=(), operator==(), and setArea().
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Definition at line 90 of file tracepeak.h.
Referenced by TracePeak(), containsRt(), getLeftBoundary(), operator=(), operator==(), and setLeftBoundary().
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Definition at line 89 of file tracepeak.h.
Referenced by TracePeak(), getMaxXicElement(), operator=(), operator==(), and setMaxXicElement().
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Definition at line 91 of file tracepeak.h.
Referenced by TracePeak(), containsRt(), getRightBoundary(), operator=(), operator==(), and setRightBoundary().