libpappsomspp
Library for mass spectrometry
pappso::Peptide Member List
This is the complete list of members for
pappso::Peptide
, including all inherited members.
addAaModification
(AaModificationP aaModification, unsigned int position)
pappso::Peptide
begin
()
pappso::Peptide
inline
begin
() const
pappso::Peptide
inline
countModificationOnAa
(AaModificationP mod, const std::vector< char > &aa_list) const
pappso::Peptide
end
()
pappso::Peptide
inline
end
() const
pappso::Peptide
inline
getAa
(unsigned int position)
pappso::Peptide
getAaPositionList
(char aa) const
pappso::Peptide
getAaPositionList
(std::list< char > list_aa) const
pappso::Peptide
getConstAa
(unsigned int position) const
pappso::Peptide
getFormula
(unsigned int charge) const final
pappso::PeptideInterface
virtual
getInternalCterModification
() const
pappso::Peptide
getInternalNterModification
() const
pappso::Peptide
getLiAbsoluteString
() const
pappso::Peptide
getMass
()
pappso::Peptide
getMass
() const override
pappso::Peptide
inline
virtual
getModificationPositionList
(AaModificationP mod) const
pappso::Peptide
getModificationPositionList
(AaModificationP mod, const std::vector< char > &aa_list) const
pappso::Peptide
getMz
(unsigned int charge) const final
pappso::Ion
virtual
getName
() const
pappso::PeptideInterface
inline
virtual
getNumberOfAtom
(AtomIsotopeSurvey atom) const override
pappso::Peptide
virtual
getNumberOfIsotope
(Isotope isotope) const override
pappso::Peptide
virtual
getNumberOfModification
(AaModificationP mod) const
pappso::Peptide
getSequence
() const override
pappso::Peptide
virtual
getSequenceLi
() const
pappso::PeptideInterface
virtual
Ion
()
pappso::Ion
isPalindrome
() const override
pappso::Peptide
virtual
m_aaVec
pappso::Peptide
protected
m_proxyMass
pappso::Peptide
protected
makeNoConstPeptideSp
() const
pappso::Peptide
makePeptideSp
() const
pappso::Peptide
matchPeak
(PrecisionPtr precision, pappso_double peak_mz, unsigned int charge) const final
pappso::PeptideInterface
inline
virtual
operator<
(const Peptide &l, const Peptide &r)
pappso::Peptide
friend
operator==
(const Peptide &l, const Peptide &r)
pappso::Peptide
friend
Peptide
(const QString &pepstr)
pappso::Peptide
Peptide
(const Peptide &peptide)
pappso::Peptide
Peptide
(Peptide &&toCopy)
pappso::Peptide
rbegin
() const
pappso::Peptide
inline
removeAaModification
(AaModificationP mod)
pappso::Peptide
removeCterAminoAcid
()
pappso::Peptide
removeInternalCterModification
()
pappso::Peptide
removeInternalNterModification
()
pappso::Peptide
removeNterAminoAcid
()
pappso::Peptide
rend
() const
pappso::Peptide
inline
replaceAaModification
(AaModificationP oldmod, AaModificationP newmod)
pappso::Peptide
replaceLeucineIsoleucine
()
pappso::Peptide
reverse
()
pappso::Peptide
rotate
()
pappso::Peptide
setInternalCterModification
(AaModificationP mod)
pappso::Peptide
setInternalNterModification
(AaModificationP mod)
pappso::Peptide
size
() const override
pappso::Peptide
inline
virtual
toAbsoluteString
() const
pappso::Peptide
toString
() const
pappso::Peptide
~Ion
()
pappso::Ion
~Peptide
()
pappso::Peptide
virtual
Generated on Sun Jan 1 2023 15:24:07 for libpappsomspp by
1.9.1