libpappsomspp
Library for mass spectrometry
fastaoutputstream.h
Go to the documentation of this file.
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/*******************************************************************************
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* Copyright (c) 2015 Olivier Langella <Olivier.Langella@moulon.inra.fr>.
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*
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* This file is part of the PAPPSOms++ library.
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*
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* PAPPSOms++ is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* PAPPSOms++ is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
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*
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******************************************************************************/
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#pragma once
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#include <QTextStream>
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#include "
fastawriterinterface.h
"
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namespace
pappso
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{
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class
PMSPP_LIB_DECL
FastaOutputStream
:
public
FastaWriterInterface
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{
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public
:
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FastaOutputStream
(QTextStream &otxtstream);
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~
FastaOutputStream
();
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void
writeProtein(
const
Protein
&protein)
override
;
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private
:
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QTextStream &
m_ofastastream
;
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};
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}
// namespace pappso
pappso::FastaOutputStream
Definition:
fastaoutputstream.h:29
pappso::FastaOutputStream::m_ofastastream
QTextStream & m_ofastastream
Definition:
fastaoutputstream.h:37
pappso::FastaWriterInterface
Definition:
fastawriterinterface.h:29
pappso::Protein
Definition:
protein.h:50
PMSPP_LIB_DECL
#define PMSPP_LIB_DECL
Definition:
exportinmportconfig.h:14
fastawriterinterface.h
pappso
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition:
aa.cpp:39
pappsomspp
fasta
fastaoutputstream.h
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