accept(MsRunDataSetTreeNodeVisitorInterface &visitor) | pappso::MsRunDataSetTree | |
accept(MsRunDataSetTreeNodeVisitorInterface &visitor, std::vector< pappso::MsRunDataSetTreeNode * >::const_iterator nodes_begin_iterator, std::vector< pappso::MsRunDataSetTreeNode * >::const_iterator nodes_end_iterator) | pappso::MsRunDataSetTree | |
addDataSetQualMassSpectraInsideDtRtRange(double start, double end, QualMassSpectraVector &mass_spectra, DataKind data_kind) const | pappso::MsRunDataSetTree | |
addDataSetTreeNodesInsideDtRtPolygon(const SelectionPolygon &selectionPolygon, NodeVector &nodes, DataKind data_kind) const | pappso::MsRunDataSetTree | |
addDataSetTreeNodesInsideDtRtRange(double start, double end, NodeVector &nodes, DataKind data_kind) const | pappso::MsRunDataSetTree | |
addMassSpectrum(QualifiedMassSpectrumCstSPtr mass_spectrum) | pappso::MsRunDataSetTree | |
addMassSpectrum(QualifiedMassSpectrumCstSPtr mass_spectrum, MsRunDataSetTreeNode *parent) | pappso::MsRunDataSetTree | private |
addMassSpectrum(QualifiedMassSpectrumCstSPtr mass_spectrum, std::size_t precursor_spectrum_index) | pappso::MsRunDataSetTree | private |
depth() const | pappso::MsRunDataSetTree | |
documentNodeInDtRtMap(double time, MsRunDataSetTreeNode *node_p, DataKind data_kind) | pappso::MsRunDataSetTree | private |
DoubleNodeVectorMap typedef | pappso::MsRunDataSetTree | |
findNode(QualifiedMassSpectrumCstSPtr mass_spectrum_csp) const | pappso::MsRunDataSetTree | |
findNode(std::size_t spectrum_index) const | pappso::MsRunDataSetTree | |
flattenedView() | pappso::MsRunDataSetTree | |
flattenedViewMsLevel(std::size_t ms_level, bool with_descendants=false) | pappso::MsRunDataSetTree | |
getIndexNodeMap() const | pappso::MsRunDataSetTree | |
getRootNodes() const | pappso::MsRunDataSetTree | |
getSpectrumCount() const | pappso::MsRunDataSetTree | |
indexNodeMapSize() const | pappso::MsRunDataSetTree | |
m_dtDoubleNodeVectorMap | pappso::MsRunDataSetTree | private |
m_indexNodeMap | pappso::MsRunDataSetTree | private |
m_rootNodes | pappso::MsRunDataSetTree | private |
m_rtDoubleNodeVectorMap | pappso::MsRunDataSetTree | private |
m_spectrumCount | pappso::MsRunDataSetTree | private |
massSpectrumIndex(const MsRunDataSetTreeNode *node) const | pappso::MsRunDataSetTree | |
massSpectrumIndex(QualifiedMassSpectrumCstSPtr qualified_mass_spectrum_csp) const | pappso::MsRunDataSetTree | |
mcsp_msRunId | pappso::MsRunDataSetTree | private |
MsRunDataSetTree(MsRunIdCstSPtr ms_run_id_csp) | pappso::MsRunDataSetTree | |
NodeVector typedef | pappso::MsRunDataSetTree | |
precursorNodeByProductSpectrumIndex(std::size_t product_spectrum_index) | pappso::MsRunDataSetTree | |
precursorNodesByPrecursorMz(pappso_double mz, PrecisionPtr precision_ptr) | pappso::MsRunDataSetTree | |
productNodesByPrecursorSpectrumIndex(std::size_t precursor_spectrum_index) | pappso::MsRunDataSetTree | |
QualMassSpectraVector typedef | pappso::MsRunDataSetTree | |
removeDataSetQualMassSpectraOutsideDtRtRange(double start, double end, QualMassSpectraVector &mass_spectra, DataKind data_kind) const | pappso::MsRunDataSetTree | |
removeDataSetTreeNodesOutsideDtRtRange(double start, double end, NodeVector &nodes, DataKind data_kind) const | pappso::MsRunDataSetTree | |
size() const | pappso::MsRunDataSetTree | |
~MsRunDataSetTree() | pappso::MsRunDataSetTree | virtual |