libpappsomspp
Library for mass spectrometry
filtertriangle.h
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1 /**
2  * \file pappsomspp/filers/filtertriangle.h
3  * \date 27/10/2019
4  * \author Olivier Langella
5  * \brief sum peaks under a triangle base
6  */
7 
8 /*******************************************************************************
9  * Copyright (c) 2019 Olivier Langella <Olivier.Langella@u-psud.fr>.
10  *
11  * This file is part of the PAPPSOms++ library.
12  *
13  * PAPPSOms++ is free software: you can redistribute it and/or modify
14  * it under the terms of the GNU General Public License as published by
15  * the Free Software Foundation, either version 3 of the License, or
16  * (at your option) any later version.
17  *
18  * PAPPSOms++ is distributed in the hope that it will be useful,
19  * but WITHOUT ANY WARRANTY; without even the implied warranty of
20  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
21  * GNU General Public License for more details.
22  *
23  * You should have received a copy of the GNU General Public License
24  * along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
25  *
26  ******************************************************************************/
27 
28 #pragma once
29 
30 #include "filterinterface.h"
31 
32 #include "../../trace/trace.h"
33 
34 namespace pappso
35 {
36 /**
37  * @todo sum peaks under a triangle base
38  */
40 {
41  public:
42  /**
43  * Default constructor
44  */
46 
47  /**
48  * Copy constructor
49  *
50  * @param other TODO
51  */
52  FilterTriangle(const FilterTriangle &other);
53 
54  /**
55  * Destructor
56  */
57  ~FilterTriangle();
58 
59  double setTriangleSlope(double intensity, double mz);
60  Trace &filter(Trace &data_points) const override;
61 
62 
63  private:
64  DataPoint sumAndRemove(Trace &trace, const DataPoint &max_intensity) const;
65 
66  private:
68  double m_maxMzRange = 0;
69 };
70 } // namespace pappso
generic interface to apply a filter on a trace
A simple container of DataPoint instances.
Definition: trace.h:148
#define PMSPP_LIB_DECL
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition: aa.cpp:39