libpappsomspp
Library for mass spectrometry
pappso::Peptide Member List

This is the complete list of members for pappso::Peptide, including all inherited members.

addAaModification(AaModificationP aaModification, unsigned int position)pappso::Peptide
begin()pappso::Peptideinline
begin() constpappso::Peptideinline
countModificationOnAa(AaModificationP mod, const std::vector< char > &aa_list) constpappso::Peptide
end()pappso::Peptideinline
end() constpappso::Peptideinline
getAa(unsigned int position)pappso::Peptide
getAaPositionList(char aa) constpappso::Peptide
getAaPositionList(std::list< char > list_aa) constpappso::Peptide
getConstAa(unsigned int position) constpappso::Peptide
getFormula(unsigned int charge) const finalpappso::PeptideInterfacevirtual
getInternalCterModification() constpappso::Peptide
getInternalNterModification() constpappso::Peptide
getLiAbsoluteString() constpappso::Peptide
getMass()pappso::Peptide
getMass() const overridepappso::Peptideinlinevirtual
getModificationPositionList(AaModificationP mod) constpappso::Peptide
getModificationPositionList(AaModificationP mod, const std::vector< char > &aa_list) constpappso::Peptide
getMz(unsigned int charge) const finalpappso::Ionvirtual
getName() constpappso::PeptideInterfaceinlinevirtual
getNumberOfAtom(AtomIsotopeSurvey atom) const overridepappso::Peptidevirtual
getNumberOfIsotope(Isotope isotope) const overridepappso::Peptidevirtual
getNumberOfModification(AaModificationP mod) constpappso::Peptide
getSequence() const overridepappso::Peptidevirtual
getSequenceLi() constpappso::PeptideInterfacevirtual
Ion()pappso::Ion
isPalindrome() const overridepappso::Peptidevirtual
m_aaVecpappso::Peptideprotected
m_proxyMasspappso::Peptideprotected
makeNoConstPeptideSp() constpappso::Peptide
makePeptideSp() constpappso::Peptide
matchPeak(PrecisionPtr precision, pappso_double peak_mz, unsigned int charge) const finalpappso::PeptideInterfaceinlinevirtual
operator<(const Peptide &l, const Peptide &r)pappso::Peptidefriend
operator==(const Peptide &l, const Peptide &r)pappso::Peptidefriend
Peptide(const QString &pepstr)pappso::Peptide
Peptide(const Peptide &peptide)pappso::Peptide
Peptide(Peptide &&toCopy)pappso::Peptide
rbegin() constpappso::Peptideinline
removeAaModification(AaModificationP mod)pappso::Peptide
removeCterAminoAcid()pappso::Peptide
removeInternalCterModification()pappso::Peptide
removeInternalNterModification()pappso::Peptide
removeNterAminoAcid()pappso::Peptide
rend() constpappso::Peptideinline
replaceAaModification(AaModificationP oldmod, AaModificationP newmod)pappso::Peptide
replaceLeucineIsoleucine()pappso::Peptide
reverse()pappso::Peptide
rotate()pappso::Peptide
setInternalCterModification(AaModificationP mod)pappso::Peptide
setInternalNterModification(AaModificationP mod)pappso::Peptide
size() const overridepappso::Peptideinlinevirtual
toAbsoluteString() constpappso::Peptide
toString() constpappso::Peptide
~Ion()pappso::Ion
~Peptide()pappso::Peptidevirtual